ADVANCED CELL BIOLOGY//MOLECULAR BIOLOGY OF CELLS

Fall 2009       LECTURE SCHEDULE: 01-146:470 + 16-148:514

 

 Course coordinator: Prof. David Denhardt (Nelson, A301, ;

Faculty: Prof. Ron Hart (rhart@rci.rutgers.edu); Prof. Charles Martin (martin@biology.rutgers.edu);

Prof.Martin Grumet (mgrumet@rci.rutgers.edu); Prof. Beatrice Haimovich (Haimovich@umdnj.edu);

Prof. Gary Brewer (brewerga@umdnj.edu); Prof. Guy Werlen (werlen@biology.rutgers.edu);

Prof. Barth Grant (grant@biology.rutgers.edu); Prof. Yacov Ron (yron@umdnj.edu).

First period (8:40-10:00 AM) Monday and Thursday, Fall semester - SEC 118.

The text is MOLECULAR CELL BIOLOGY by Lodish, Berk, Matsudaira, Kaiser, et al. 6ed, WH Freeman.

Website access: http://lifesci.rutgers.edu/~denhardt/course/AdvCellBiol.2009.htm

(for Dr. Hart’s lectures it is: http://spine.rutgers.edu/cellbio/default.htm).

 

September 3 - Course overview; review of cell structure and function DTD (Chapters 1, 2)   PPT     PDF

September 8 (Tues) - Nucleic acid structure and function, RH (4.1 – 4.4)

September 10 - Protein structure and function, CM (3.1-3.5)  PDF   HMWK

September 14 - DNA replication and repair, RH (4.5 – 4.6) 

September 17 – Methods to study and manipulate DNA and proteins RH (5.1 - 5.3)

September 21– Chromatin structure and mobile genetic elements RH (6.1 – 6.3, 6.6)

September 24 - The Cell Cycle, DTD (Chapter 20.1 – 20.7) HMWK    PPT    PDF  

September 28 - Methods to study and manipulate DNA and proteins RH (5.4 - 5.5)

October 1 –  Genomics RH (6.5)

October 5 - Exam #1

October 8 - Biomembranes, structure function, CM (Chapter 10, 13.1-13.3,13.6)   HMWK   PPT   PDF

October 12 - Membrane Transport, CM (Chapter 11)   HMWK    PPT    PDF        

October 15 - Secretion BG (Chapter 9.1, 14.1-14.4) HMWK     PPT    PDF    KELL  UOBF   BG1  BG3  BG4

October 19 - Endocytosis  BG (Chapter 9.2-9.3, 14.5-14.6)   HMWK   PPT   PDF  BG2RAB5   CLATHRIN

October 22 - Transcription, GB (Sections 7.1 – 7.8, 21.3, pp. 969-977)  HMWK    PPT    PDF   

October 26 - RNA processing I, GB (Sections 8.1 through 8.3 and pp 357-367)   PPT   PDF

October 29 - RNA processing II, GB (pp.352-353 [“Degradation of mRNA and P Bodies”); section 13.6)

November 2 - Translation, GB (4.3,4,4; pp347-356; Sect 13.1; pp908-910; figs + legends in attached paper PPT  PDF

November 5 - Immunity, YR (Chapter 24)  HMWK   PPT   PDF

November 9 – Exam #2

November 12 - The Cytoskeleton, BH (Chapter 17)  HMWK    PPT   PDF

November 16 - Motor Proteins, BH (Chapter 17-18)  PPT    PDF

November 19 - Movement and Cell Motility, BH (Chapter 18).  PPT    PDF

November 23 – Signal Transduction I: (GW) Chapter 15: intro, 15.1, 15.2, 15.3, 15.4, 15.6, 15.7.   PPT    PDF    HMWK   

November 30 - Signal Transduction II: (GW) Chapter 16: intro, 16.2, 16.3, 16.4, 16.5, 16.7.   PPT    PDF   

December 3 - Cell Junctions and Cell adhesion MG (Sections 9.5, 19.1, 19.2, 19.5)   PPT    PDF    HMWK   

December 7 - Extracellular Matrix/Neural Development MG (Sections 19.3, 19.4, 22.3, 22.5)  PPT    PDF   HMWK1   HMWK2   HMWK3

December 10 - Cancer, DTD (Chapter 25)   PPT    PDF   

Dec 17 - exam #3    146:470       148:514     146:470FinalGrade       148:514Final Grade

The third 80-min exam (#3) will be given on Thursday Dec 17 from 9:00 - 10:20 AM in the Physics Lecture Hall (which is the round building that sits close to Freulinghuysen Road near the SEC Building).  

 

Course evaluation: Please note that the powerpoint slides for each lecture can be accessed by clicking on the highlighted title; homework questions are accessed similarly. There will be three 80-min exams that will count for 80% of the grade. Before each lecture, students will submit to Dr. Denhardt or the lecturer brief answers to questions on the subject of the lecture. The quality of the students’ answers will count for 20% (undergraduates) and 10% (graduate students). The graduate students will be asked to write a 3-5-page paper on a topic of their choice. This paper, worth 10% of the final grade, must be submitted to the professor who will grade it no later than Friday, Dec. 11. The paper may be on any subject covered by any of the lecturers. The format of the paper (e.g. a critical review of a subject or a critique of a paper) must be approved in advance by Dr. Denhardt and the professor who will grade it. A key part of the grade will be evidence of creative thinking, as opposed to simply a rehash of the literature, on the part of the student.